BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F09LP1|AL427191
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1854 0.0
3x_Contig1569 153 7e-37
3x_Contig1799 145 2e-34
3x_Contig1772 143 7e-34
>3x_Contig1712
Length = 23668
Score = 1854 bits (934), Expect = 0.0
Identities = 969/976 (99%), Gaps = 4/976 (0%)
Strand = Plus / Minus
Query: 4 ctgttgaaggaccttcttggaatatgtataaaaattatctagaaagtctagatagctgat 63
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10034 ctgttgaaggaccttcttggaagatgtataaaaattatctagaaagtctagatagctgat 9975
Query: 64 aatatatttaaggtaaggacgttacatgttattaccggcttattaaaggccaagcatttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9974 aatatatttaaggtaaggacgttacatgttattaccggcttattaaaggccaagcatttt 9915
Query: 124 gaaatccaagttgccgaatataatagtcgacaagcaaaaaagaatgccacctccaggaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9914 gaaatccaagttgccgaatataatagtcgacaagcaaaaaagaatgccacctccaggaat 9855
Query: 184 cgaacctgggtttcatcggccacaacgatgtgtaataacccctatactaagatggccgaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9854 cgaacctgggtttcatcggccacaacgatgtgtaataacccctatactaagatggccgaa 9795
Query: 244 ttcattgaaagttgaagttaggtcgccattatactgtataactgtcatcagctatcttag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9794 ttcattgaaagttgaagttaggtcgccattatactgtataactgtcatcagctatcttag 9735
Query: 304 ttactatgctctttgcgtas-ttgtcttttatcatcataaccagaataagatcgtcgaat 362
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 9734 ttactatgctctttgcgtagcttgtcttttatcatcataaccagaataagatcgtcgaat 9675
Query: 363 atggacttctcctcacctatagcagttgcactcatgaagtgaaagttactctttcaaacg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9674 atggacttctcctcacctatagcagttgcactcatgaagtgaaagttactctttcaaacg 9615
Query: 423 gcgcagtcacgtgaaggagtgtcctcaaagaagggacgcaaaattgcggtaccttcgtat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9614 gcgcagtcacgtgaaggagtgtcctcaaagaagggacgcaaaattgcggtaccttcgtat 9555
Query: 483 ttaccggccgagatgatcctttttcatacgattgcaaatattccaaaataaatgcacaat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9554 ttaccggccgagatgatcctttttcatacgattgcaaatattccaaaataaatgcacaat 9495
Query: 543 ttcaggaacgtgataacctgttgaacgatgtgatcggttggttttcacgttactttggta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9494 ttcaggaacgtgataacctgttgaacgatgtgatcggttggttttcacgttactttggta 9435
Query: 603 cgttggatcaacgctaaaccaaaaagtaaacctggcctgctcgctccctatgcaacaaca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9434 cgttggatcaacgctaaaccaaaaagtaaacctggcctgctcgctccctatgcaacaaca 9375
Query: 663 gcctattgcaaaggtaaatccttaatgaaagcaagttttgaaacactaggcgcgatgcct 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9374 gcctattgcaaaggtaaatccttaatgaaagcaagttttgaaacactaggcgcgatgcct 9315
Query: 723 ggcatttacaagaatgaattctttcccttatttactctcttacgttgagcgttttcggat 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9314 ggcatttacaagaatgaattctttcccttatttactctcttacgttgagcgttttcggat 9255
Query: 783 attgtcttcgaaaccattggtatgattttcataaccttgttaaactgcagatcaagcgaa 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9254 attgtcttcgaaaccattggtatgattttcataaccttgttaaactgcagatcaagcgaa 9195
Query: 843 aatctcaaacaatgtacaaaaaatgtacaacaatgaggcagcgagatgaaaggaagtttg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9194 aatctcaaacaatgtacaaaaaatgtacaacaatgaggcagcgagatgaaaggaagtttg 9135
Query: 903 acgaatattcttggtgg-aaacttcttccagcattttacatcaaa-caatgacgg-ttcg 959
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 9134 acgaatattcttggtggaaaacttcttccagcattttacatcaaatcaatgacggtttcg 9075
Query: 960 aatctcgcatatgttt 975
| ||||||||||||||
Sbjct: 9074 attctcgcatatgttt 9059
>3x_Contig1569
Length = 11625
Score = 153 bits (77), Expect = 7e-37
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 159 aaaaaagaatgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaa 218
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7086 aaaaaataatgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaa 7027
Query: 219 taacccctatactaagatggc 239
|||||||||||||||||||||
Sbjct: 7026 taacccctatactaagatggc 7006
>3x_Contig1799
Length = 39855
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 167 atgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataacccct 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30427 atgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataacccct 30368
Query: 227 atactaagatggc 239
|||||||||||||
Sbjct: 30367 atactaagatggc 30355
>3x_Contig1772
Length = 25851
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 168 tgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataaccccta 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11892 tgccacctccaggaatcgaacctgggtttcatcggccacaacgatgtgtaataaccccta 11951
Query: 228 tactaagatggc 239
||||||||||||
Sbjct: 11952 tactaagatggc 11963
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6941
Number of Sequences: 1807
Number of extensions: 6941
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 4
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)